#include "gn/gnSequence.h"
#include "gn/gnGBKSource.h"
#include "gn/gnFASSource.h"
#include <algorithm>
Include dependency graph for testTests.cpp:
Go to the source code of this file.
Functions | |
void | ComplementLocation (vector< gnLocation > &l_list) |
void | DeleteRepeats (list< gnLocation > &loc_list) |
boolean | LocationEndLessthan (const gnLocation &a, const gnLocation &b) |
boolean | LocationLessthan (const gnLocation &a, const gnLocation &b) |
boolean | LocationSizeLessthan (const gnLocation &a, const gnLocation &b) |
int | main (int argc, char *argv[]) |
void | print_usage (char *pname) |
void | WriteData (gnSequence &file_sequence, list< gnLocation > &loc_list, string &filename) |
void | WriteList (list< gnLocation > &loc_list, string &filename) |
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Definition at line 26 of file testTests.cpp. References LocationLessthan(), gnLocation::SetEnd(), gnLocation::SetStart(), and uint32. Referenced by main(). |
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Definition at line 52 of file testTests.cpp. References LocationEndLessthan(), and LocationLessthan(). Referenced by main(). |
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Definition at line 14 of file testTests.cpp. References gnLocation::GetEnd(), and gnLocation::GetStart(). Referenced by DeleteRepeats(). |
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Definition at line 8 of file testTests.cpp. References gnLocation::GetStart(). Referenced by ComplementLocation(), and DeleteRepeats(). |
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Definition at line 20 of file testTests.cpp. References gnLocation::GetEnd(), and gnLocation::GetStart(). |
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Definition at line 100 of file testTests.cpp. Referenced by main(). |
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Definition at line 73 of file testTests.cpp. References gnSequence::ToString(), uint32, and gnFASSource::Write(). Referenced by main(). |
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Definition at line 91 of file testTests.cpp. Referenced by main(). |